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Kim and Tom on the hunt

Publications

Davis Lab - Rudman 123 and 125
Department of Biological Sciences
University of New Hampshire

Publications

Mathey, M.M., S. Mookerjee, K. Gündüz, J.F. Hancock, A.F. Iezzoni, L.L. Mahoney, T.M. Davis, N.V. Bassil, K.E. Hummer, P.J. Stewart, V.M. Whitaker, D.J. Sargent, B. Denoyes, I. Amaya, E. van de Weg, and C.E. Finn. 2013.
Large-scale standardized phenotyping of strawberry in RosBREED. J. Amer. Pom. Soc. (accepted, in press).


Hummer KE, Ballington JR, Finn CE, and Davis TM. 2013. Asian germplasm influences on American berry crops. HortScience 48(9):1-5.

Chatterjee M, Bermudez-Lozano CL, Clancy MA, Davis TM, Folta KM, 2011
A Strawberry KNOX Gene Regulates Leaf, Flower and Meristem Architecture.
PLoS ONE 6(9): e24752. doi:10.1371/journal.pone.0024752

Shulaev et al. (68 authors, T.M. Davis, contributing author) 2010. The genome of the woodland strawberry. Nature Genetics.
published online 26 December 2010; doi:10.1038/ng.740.
http://www.nature.com/ng/journal/v43/n2/full/ng.740.html

Folta KM, Clancy MA, Chamala S, Brunings AM, Dhingra A, Gomide L, Kulathinal RJ, Peres N, Davis TM, and Barbazuk WB. 2010.
A transcript accounting from diverse tissues of a cultivated strawberry.
The Plant Genome, 3:90-105. (https://www.crops.org/publications/tpg/articles/3/2/90)

Davis TM, Shields ME, Zhang Q, Tombolato-Terzić, D, Bennetzen JL, Pontaroli AC, Wang H, Yao Q, SanMiguel P, and Folta KM. 2010.
An examination of targeted gene neighborhoods in strawberry.
BMC Plant Biology, 10:81.(http://www.biomedcentral.com/1471-2229/10/81)

Davis TM, Shields ME, Reinhard AE, Reavey PA, Lin J, Zhang H, and Mahoney LL. 2010.
Chloroplast DNA inheritance, ancestry, and sequencing in Fragaria. Acta Hort. 859:221-228.

Mahoney LL, Quimby ML, Shields ME, and Davis TM. 2010.
Mitochondrial DNA transmission, ancestry, and sequencing in Fragaria. Acta Hort. 859:301-308.

Orcheski BO, and Davis TM. 2010. An enhanced method for sequence walking and paralog mining:
TOPO® Vector-Ligation PCR. BMC Research Notes, 3:61. (http://www.biomedcentral.com/1756-0500/3/61)

Mahoney L, Davis TM, Curran-Celentano J. 2009. Investigation of cyanidin and pelargonidin contents
in the genus Fragaria L.  In: J. Lopez-Medina (ed.). Proceedings of the VIth International Strawberry Symposium.
Acta Hort. 842:915-918.

Davis TM, Shields ME, Zhang Q, Poulsen EG, Folta KM, Bennetzen JL, San Miguel P. 2009.
The strawberry genome is coming into view. In: J. Lopez-Medina (ed.).
Proceedings of the VIth International Strawberry Symposium.
Acta Hort. 842:533-536.

Njuguna W, Hummer KE, Richards C, Davis TM, and Bassil NV. 2009.
Genetic diversity of Japanese strawberry species based on microsatellite markers.
In: J. Lopez-Medina (ed.). Proceedings of the VIth International Strawberry Symposium.
Acta Hort. 842:581-584.

Vining K and Davis T. 2009. Isolation of a Ve homolog, mVe1, and its relationship to verticillium wilt resistance in
Mentha longifolia (L.) Huds. MGG. 282(2):173-184.

Pontaroli AC, Rogers RL, Zhang Q, Shields ME, Davis TM, Folta KM, SanMiguel P,
and Bennetzen JL. 2009. Gene content and distribution in the nuclear genome of Fragaria vesca.
The Plant Genome. 2(1):93-101
(Plant Gen.-2009-Pontaroli-93-101.pdf).

Sargent DJ, Davis TM, Simpson DW. 2009. Strawberry (Fragaria spp.) structural genomics.
In: Gardiner S and Folta KM (eds) Genetics and Genomics of Rosaceae.
Springer, Heidelberg, Berlin, New York.
Pages 437-456.

Shulaev V, Korban SS, Sosinski B, Abbott  AG, Aldwinckle HS, Folta KM, Iezzoni A, Main D, Arús P,
Dandekar AM, Lewers K, Brown SK, Davis TM, Gardiner SE, Potter D, Veilleux RE.  2008.
Multiple models for Rosaceae genomics. Plant Physiology 147: 985-1003.

Quintana A, Davis TM, Griesbach RJ, and Freyre R. 2008.
Genetic studies of flower color in Anagallis monelli L. J.
Amer. Soc. Hort. Sci. 43(6):1680-1685.

Davis TM, Folta KM, Shields ME, and Zhang Q. 2008.
Gene pair markers: an innovative tool for comparative linkage mapping. pp. 105-107. 
In:  Takeda F, Handley DT, and Poling EB (ed.).  Proc. 2007 N. American Strawberry Symposium. 
North American Strawberry Growers Association, Kemptville, ON Canada.

Folta  KM and Davis TM. 2008. Transformation systems to study gene function in Fragaria. p. 94-99. 
In:  Takeda F, Handley DT, and Poling EB (ed.). 
Proc. 2007 N. American Strawberry Symposium. 
North American Strawberry Growers Association, Kemptville, ON Canada.

Vining KJ, Zhang Q, Smith CA, Davis TM. 2007.
Identification of resistance gene analogs and verticillium resistance-like sequences in
Mentha longifolia.

J. Amer. Soc. Hort. Sci. 132(4):1-10.

Davis TM , Denoyes-Rothan B, and Lerceteau-Kohler E. 2007.
Strawberry. In: Kole C (ed) Genome Mapping & Molecular Breeding in Plants IV: Fruits and Nuts.
Springer, Heidelberg, Berlin, New York.

Folta KM and Davis TM. 2006. Strawberry genes and genomes.
Crit. Rev. Plant Sci. 25:399-415.

Davis TM, DiMeglio LM, Yang R, Styan SMN, and Lewers KS. 2006.
Assessment of SSR marker transfer from the cultivated strawberry to diploid strawberry species:
functionality, linkage group assignment, and use in diversity analysis.
J. Amer. Soc. Hort. Sci. 131:506-512.

Monfort A, Vilanova S, Davis TM, and Arus P. 2006.
A new set of polymorphic Simple-Sequence Repeat markers (SSRs) from a wild strawberry (Fragaria vesca)
are transferable to other diploid Fragaria species and to Fragaria ×ananassa.
Molecular Ecology Notes. 6:197-200.

Vining KJ, Zhang Q, Tucker AO, Smith C, and Davis TM. 2005.
Mentha longifolia
(L.) L. : A model species for mint genetic research.
HortScience. 40:1225-1229.

Sargent D, Davis TM,  Tobutt K,  Wilkinson M,  Battey N,  Simpson D. 2004.
A genetic linkage map of microsatellite, gene specific and morphological markers in diploid Fragaria.
TAG 109:1385-1391.

Staudt S, DiMeglio L, Davis TM, and Gerstberger P. 2003.
Fragaria
xbifera Duch.: Origin and Taxonomy. Bot. Jahrb.
Syst. 125:53-72.

Deng C and Davis TM. 2001. Molecular identification of the yellow fruit color (c) locus in diploid   strawberry: a candidate gene approach. TAG 103:316-322.

Lin J, and Davis TM. 2000. S1 analysis of long PCR heteroduplexes: detection of chloroplast       Indel polymorphisms in Fragaria. TAG :101:415-420.

Haymes KM and Davis TM. 1998. Agrobacterium-mediated transformation of 'Alpine' Fragaria vesca, and transmission of transgenes to R1 progeny. Plant Cell Reports 17:279-283.

Haymes KM, Henken B, Davis TM, and van de Weg WE. 1997. Identification of RAPD markers linked to a Phytophthora fragariae resistance gene (Rpf1) in the cultivated strawberry. Theor. Appl. Genet. 94:1097-1101.

Davis TM and Yu H. 1997.  A linkage map of the diploid strawberry, Fragaria vesca. J. Hered. 88:215-221.

Davis TM, Yu H, and Haymes KM. 1996. Genetic linkage group structure in the diploid
strawberry: evidence for chromosome differentiation between Fragaria vesca and F. viridis.  4th North American Strawberry Conf. Orlando, Florida, Feb. 15-17, 1995. University of Florida, publisher.

Davis TM. 1996. The use of molecular markers to accelerate cultivar development in Fragaria. Proc. 4th North American Strawberry Conf. Orlando, Florida, Feb. 15-17, 1995. University of Florida, publisher.

Yu H, and Davis TM. 1995. Genetic linkage between runnering and phosphoglucoisomerase allozymes, and systematic distortion of monogenic segregation ratios in the diploid strawberry. J. Amer. Soc. Hort. Sci. 120:687-690.

Williamson SC, Yu H, and Davis TM. 1995. Shikimate dehydrogenase allozymes: Inheritance and close linkage to fruit color in the diploid strawberry. J. Hered. 86:74-76.

Davis TM, Yu H, Haigis KM, and McGowan PJ. 1995. Template mixing: a method of enhancing detection and interpretation of codominant RAPD markers. Theor. Appl. Genet. 91:582-588.

Davis TM. 1993. How to make a red-nosed reindeer. Lilacs (Quarterly J. Internat.
Lilac Soc.) 22:16-19.

Greene AE, and Davis TM.  1991.  Regeneration of Fragaria vesca plants from leaf tissue.  In:  A. Dale and J.J. Luby (eds.) The strawberry into the 21st century.  pp. 124-25.  Timber Press, Inc. Portland, OR.

Davis TM, and Pollard JE.  1991.  Fragaria vesca chlorophyll mutants.  Hort. Sci. 26:311.